DImodels12 months ago
Getting Started with DImodels | DImodels installation and load | Accessing an introduction to Diversity-Introductions models | Datasets included in the DImodels package | The sim3 dataset | Exploring the data | Implementing an automated DI model fitting process using autoDI | Fitting individual models using the DI function | Fitting the final model selected by autoDI using DI | Re-fitting the final model selected by autoDI estimating theta using update_DI | Grouping the species identity effects in the model | Fitting customised models using the DI function | Including treatment by species identity term interactions using extra_formula | Including treatment by species interaction terms using extra_formula | Fitting only a subset of the FG interaction terms using custom_formula | Making predictions and testing contrasts for DI models | Predictions using a DI model | Uncertainity around predictions | Contrasts for DI models | Compact letter display (CLD) for community comparisons | References